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3 Publications visible to you, out of a total of 3
Effect of graphite oxide on the catalytic behavior of (S)-selective amine transaminases

Abstract (Expand)

Graphite oxide (GO) has been used for the immobilization of several classes of enzymes, exhibiting very interesting properties as immobilization matrix. However, the effect the nanomaterial has on the … enzyme cannot be predicted. Herein, the effect GO has on the catalytic behavior of several (S)-selective amine transaminases ((S)-ATAs) has been investigated. These enzymes were the focus of this work as they are homodimers with pyridoxal 5’-phosphate in their active site, significantly more complex systems than other enzymes previously studied. Addition of GO (up to 0.1 mg/mL) in the reaction medium leads to activation (up to 50% improved activity) for most enzymes studied, while they maintain their temperature profile (they perform better between 40-45ºC), and their stability. However, the effect is not universal and there are enzymes that are negatively influenced by the presence of the nanomaterial. More profound is the effect on the (S)-ATA from Chromobacterium violaceum which loses almost 50% of its activity in the presence of 0.1 mg/mL GO, while the stability was significantly decreased, losing its activity after 2 h incubation at 40°C, in the presence of 25 μg/mL GO. This negative effect seems to rise from minor secondary structure alterations; namely, a loss of α-helices and subsequent increase in random coil (~3% in the presence of 25 μg/mL GO). We hypothesize that the effect the GO has on (S)-ATAs is correlated to the surface chemistry of the enzymes; the less negatively-charged enzymes are deactivated from the interaction with GO. This insight will aid the rationalization of ATA immobilization onto carbon-based nanomaterials.

Authors: Nikolaos Kaloudis, Panagiota Zygouri, Nikolaos Chalmpes, Konstantinos Spyrou, Dimitrios Gournis, Ioannis Pavlidis

Date Published: 6th Dec 2021

Publication Type: Journal

Educational reconstruction of size-depended-properties in nanotechnology for teaching in tertiary education

Abstract (Expand)

There is an overarching theme in Science Education to integrate in the school and university curriculum interdisciplinary state-of-art innovations. The field of Nanotechnology is such an example, because … it combines the aforementioned interdisciplinarity and novelty with a well-documented educational value. Herein, a novel teaching approach concerning size-dependent properties at the nanoscale for chemistry and physics undergraduate students is proposed. The analysis of the scientific content and its following reconstruction for teaching purposes is based on the theoretical framework of the Model of Educational Reconstruction (MER). This analysis yielded two fundamental concepts and a series of activities that can be the main core of teaching Nanotechnology at a university level.

Authors: Ioannis Metaxas, Emily Michailidi, Dimitris Stavrou, Ioannis V. Pavlidis

Date Published: 13th Jul 2021

Publication Type: Journal

Rational engineering of Luminiphilus syltensis ( R )-selective amine transaminase for the acceptance of bulky substrates

Abstract (Expand)

Despite the plethora of information on (S)-selective amine transaminases, the (R)-selective ones are still not well-studied; only a few structures are known to the day, and their substrate scope is … limited, apart from a few stellar works on the field. Herein, Luminiphilus syltensis (R)-selective amine transaminase’s structure was elucidated to facilitate the engineering towards variants active on bulkier substrates. V37A variant led to increased activity towards 1-phenylpropylamine and to activity against 1-butylamine. On the contrary, S248 and T249 positions, located on the β-turn in P-pocket, seem crucial for maintaining enzyme’s activity.

Authors: Eleni Konia, Konstantinos Chatzicharalampous, Athina Drakonaki, Cornelia Muenke, Ulrich Ermler, Georgios Tsiotis, Ioannis V. Pavlidis

Date Published: 2021

Publication Type: Journal

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