Models

What is a Model?
12 Models visible to you, out of a total of 12

PGK model for S. solfataricus

Creator: Jacky Snoep

Submitter: Jacky Snoep

PGK-GAPDH model Sulfolobus kouril8

Creator: Jacky Snoep

Submitter: Jacky Snoep

PGK 70C SBML

Creator: Jacky Snoep

Submitter: Jacky Snoep

Metabolic model of Sulfolobus solfataricus P2 in the SBML (sbml) and metano (txt, sce, fba) format. Scenarios are specific for growth on D-glucose or caseinhydrolysate as sole carbon source.

Creator: Helge Stark

Submitter: Helge Stark

Metabolic model of Sulfolobus solfataricus P2 in the SBML (xml) and metano (txt, sce, fba) format. Scenarios are specific for growth on D-glucose or L-fucose as sole carbon source. Different theoretical routes of L-fucose degradation were modeled (E. coli-like, Xanthomonas-like and lactaldehyde-forming). Highest overall agreement between the model and experimental data was observed for the lactaldehyde-forming route.

Creators: Jacqueline Wolf, Helge Stark, Dietmar Schomburg

Submitter: Jacqueline Wolf

Model of reconstituted gluconeogenesis system in S. solfataricus based on the individual kinetic models for PGK, GAPDH, TPI, FBPAase.

Creator: Jacky Snoep

Submitter: Jacky Snoep

Exponential decay model of gluconeogenic intermediates

Creator: Jacky Snoep

Submitter: Jacky Snoep

Mathematical model for TPI kinetics, GAP and DHAP saturation, and inhibition with 3PG and PEP.

Creator: Jacky Snoep

Submitter: Jacky Snoep

Mathematical model for GAPDH kinetics, BPG, NADPH, NADP, GAP and Pi saturation.

Creator: Jacky Snoep

Submitter: Jacky Snoep

Mathematical model for FBPAase kinetics, saturation with DHAP and GAP

Creator: Jacky Snoep

Submitter: Jacky Snoep

Mathematical model for PGK kinetics, ADP, ATP, 3PG and BPG saturation.

Creator: Jacky Snoep

Submitter: Jacky Snoep

The model describes the Entner-Doudoroff pathway in Sulfolobus solfataricus under temperature variation. The package contains source code written in FORTRAN as well as binaries for Mac OSX, Linux, and Windows. If compiling from source code, a FORTRAN compiler is required. On-line versions of the model are also available at: http://bioinfo.ux.uis.no/sulfosys http://jjj.biochem.sun.ac.za/sysmo/projects/Sulfo-Sys/index.html

Creator: Peter Ruoff

Submitter: Peter Ruoff

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