Assays

What is an Assay?
978 Assays visible to you, out of a total of 1941

Using PCA, three components, beam size 8. Clustering via MCL from Biolayout Express 3D

Data is taken from "Genome-Wide Gene Expression Analysis of the Switch between Acidogenesis and Solventogenesis in Continuous Cultures of Clostridium acetobutylicum." Grimmler et al. 2011 DOI: 10.1159/000320973

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Submitter: Finn Bacall

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: 1 hidden item

Study: 1 hidden item

No description specified
No description specified

Submitter: Mohamed Albadry

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: 1 hidden item

Study: Periportal steatosis in mice affects distinct p...

No description specified

Submitter: Mohamed Albadry

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: 1 hidden item

Study: Periportal steatosis in mice affects distinct p...

No description specified

Submitter: Mohamed Albadry

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: 1 hidden item

Study: Periportal steatosis in mice affects distinct p...

No description specified

Submitter: Mohamed Albadry

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: 1 hidden item

Study: Periportal steatosis in mice affects distinct p...

Computational prediction of physicochemical and advanced descriptors related to ADME-Tox.

Development of bioinformatic tools to investigate the role of transcription factors and 14-3-3 proteins in the regulation of genes involved in cation homeostasis.

Submitter: Falko Krause

Biological problem addressed: Model Analysis Type

Investigation: TRK1,2 Transport Systems of Saccharomyces cerev...

Study: Bioinformatic studies

No description specified

Submitter: Marta Eide

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: 1 hidden item

Study: In vivo II - GW and WY: Effects on cod lipid me...

Docking results of pteridine-based compounds in different target PTR1 and DHFR receptors and the off-target human DHFR when using an induced fit docking routine with an initial crude ligand placement step, subsequent receptor optimization in response to ligand binding and another docking step into the optimized receptor.

Docking results of trifluraline and dinitroaniline-etherphospholipid hybrids against different kinetoplastid alpha-tubulin receptors with an induced fit docking routine. The docking protocol involves an initial crude ligand placement step, subsequent receptor optimization in response to ligand binding, and another docking step into the optimized receptor.

No description specified
No description specified

Submitter: Dawie van Niekerk

Biological problem addressed: Model Analysis Type

Investigation: Glucose metabolism in Plasmodium falciparum tro...

Study: Model analysis

Excel file with experimental data for HSD11B1 inhibition in human subcutaneous and omental adipose tissue. Effect on 72h point for cortisone, and 11KA4 metabolism and respective products formed in absence or presence of AZD4017 inhibitor.

Inhibition of lactate flux due to glucose transport inhibitor

No description specified

Submitter: Falko Krause

Biological problem addressed: Model Analysis Type

Investigation: TRK1,2 Transport Systems of Saccharomyces cerev...

Study: Promotor Anaysis

No description specified

Here we present ENA-requirements compliant template and SOP for submission steps

sbgn model of signalling

Originally submitted to PLaSMo on 2012-03-05 11:53:41

Submitter: BioData SynthSys

Biological problem addressed: Gene Regulatory Network

Investigation: Beaton, Martin

Study: Insulin-like growth factor signaling - PLM_62

No description specified

Submitter: Sebastian Curth

Biological problem addressed: Model Analysis Type

Investigation: Modular Model Building

Study: Automated Model Building

Elucidation of protein networks involved in the regulation of cation homeostasis using protein interaction datasets.

Submitter: Falko Krause

Biological problem addressed: Model Analysis Type

Investigation: TRK1,2 Transport Systems of Saccharomyces cerev...

Study: Bioinformatic studies

To estimate the differnces of internal pH between the wild type, single trk1 and trk2 or double trk1 trk2 mutants, the pH-dependent variant of GFP pHluorin was expressed in cells from a multicopy plasmid, cells were grown under various conditions, and the cell fluorescence was monitored.

26 intracellular metabolites (amino acids, polyamines, TCA intermediates) in T. brucei exposed to methylene blue have been absolutely quantified using isotope ratio based MS technique.

26 intracellular metabolites (amino acids, polyamines, TCA intermediates) in T. brucei under pH stress (pH8.7) have been absolutely quantified using isotope ratio based MS technique.

intracellular metabolite measured by GC/MS and LC/MS

No description specified

Pilot experiment concerning metabolome of S. solfataricus was conducted in order to acquire SOPs regarding the technique and gain insight on differences in metabolite concentrations at 70 and 80C

We use BSA115 strain which lacks RsbU and RsbW proteins. Therefore, there is limited post-transcriptional regulation of sigmaB activity. SigmaB itself is placed downstream of Pspac, inducible by IPTG. The lacZ reporter gene is downstream of Pctc promoter. IPTG concentrations of 0.1, 0.2 and 1 mM are added in mid-exponential phase at an OD of appr. 0.3. The whole experiment runs for about eight hours.

We use BSA115 strain which lacks RsbU and RsbW proteins. Therefore, there is limited post-transcriptional regulation of sigmaB activity.

There occurs an unexpected drop in the beta-Gal activity after sigB induction. This modelling effort aims to clarify the reasons.

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